STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62032.1ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (326 aa)    
Predicted Functional Partners:
AFK62031.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.999
AFK61002.1
Hypothetical protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.983
AFK63244.1
D-ala-D-ala transporter subunit; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.983
AFK64023.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.983
AFK61335.1
Glutathione ABC transporter permease GsiD; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.978
AFK61049.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.977
AFK61525.1
Putative peptide transporter permease subunit: membrane component of ABC superfamily protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.976
AFK62653.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.969
dppF
Dipeptide transporter ATP-binding subunit; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  
 
0.960
AFK62650.1
COG4608 ABC-type oligopeptide transport system, ATPase component.
  
0.955
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.