STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62088.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
AFK62090.1
Hypothetical protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
 
    0.948
AFK62091.1
Cation ABC transporter substrate-binding protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
 
    0.925
AFK62089.1
Hypothetical protein.
  
    0.913
AFK62092.1
Cation ABC transporter ATP-binding protein; COG1121 ABC-type Mn/Zn transport systems, ATPase component.
 
    0.903
AFK62093.1
ABC transporter in pyoverdin gene cluster, permease component; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
    0.884
AFK62094.1
Hypothetical protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
    0.749
AFK62095.1
Hypothetical protein.
  
    0.690
AFK64131.1
Periplasmic chelated iron-binding protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
  
    0.501
AFK62687.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.454
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.