STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62101.1PA-phosphatase-like phosphoesterase; COG0671 Membrane-associated phospholipid phosphatase. (269 aa)    
Predicted Functional Partners:
AFK62102.1
C-lysozyme inhibitor.
       0.540
AFK62810.1
COG2124 Cytochrome P450.
  
 0.530
AFK62946.1
COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
 
 
 0.448
AFK62100.1
Beta-lactamase-like protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
    0.410
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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