STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62105.1Hypothetical protein. (539 aa)    
Predicted Functional Partners:
AFK63024.1
COG2995 Uncharacterized paraquat-inducible protein A.
  
     0.541
AFK64280.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
   
 0.532
AFK62908.1
Hypothetical protein; COG3042 Putative hemolysin.
  
     0.521
AFK64282.1
COG3562 Capsule polysaccharide export protein.
  
     0.477
AFK64273.1
Hypothetical protein.
    
 
 0.475
AFK64260.1
COG3563 Capsule polysaccharide export protein.
  
     0.467
AFK64281.1
COG3524 Capsule polysaccharide export protein.
  
    0.431
AFK62106.1
Hypothetical protein.
       0.411
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.