STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62130.1Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (233 aa)    
Predicted Functional Partners:
AFK61080.1
Hypothetical protein.
  
    0.683
AFK61546.1
Hypothetical protein.
  
    0.592
AFK62997.1
Carboxymuconolactone decarboxylase.
  
    0.589
AFK60822.1
Hypothetical protein.
  
     0.571
AFK61088.1
COG2188 Transcriptional regulators.
  
     0.528
AFK61343.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   0.505
AFK61166.1
Dehydratase; COG2030 Acyl dehydratase.
  
 
 0.444
AFK62810.1
COG2124 Cytochrome P450.
 
 
 0.418
AFK63399.1
Thioesterase superfamily protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
   
 0.416
AFK64453.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.