STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62135.1COG3258 Cytochrome c. (400 aa)    
Predicted Functional Partners:
AFK61738.1
Hypothetical protein; COG2041 Sulfite oxidase and related enzymes.
 
 
 0.958
AFK62134.1
Sulfite-dehydrogenase; COG2041 Sulfite oxidase and related enzymes.
 
 
 0.950
AFK63317.1
Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein; COG2041 Sulfite oxidase and related enzymes.
 
 
 0.947
AFK60830.1
Sulfite oxidase cytochrome subunit; COG3258 Cytochrome c.
 
  
0.928
AFK64081.1
Sulfite oxidase cytochrome subunit; COG3258 Cytochrome c.
 
  
0.924
AFK61022.1
COG2897 Rhodanese-related sulfurtransferase.
     
  0.900
AFK62136.1
Tat pathway signal sequence domain-containing protein 24; COG5501 Predicted secreted protein.
 
     0.896
AFK62139.1
Sulfur oxidation protein 1.
 
  
 0.878
AFK62137.1
Sulfur oxidation protein SoxZ.
 
     0.861
AFK62138.1
Hypothetical protein.
 
   
 0.837
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.