STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62136.1Tat pathway signal sequence domain-containing protein 24; COG5501 Predicted secreted protein. (141 aa)    
Predicted Functional Partners:
AFK62137.1
Sulfur oxidation protein SoxZ.
 
 
 
 0.992
AFK62141.1
5'-nucleotidase domain-containing protein; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
 
 
 
 0.943
AFK63317.1
Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein; COG2041 Sulfite oxidase and related enzymes.
 
  
 0.928
AFK62884.1
Sulfate thiol esterase SoxB; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
 
 
 
 0.924
AFK61738.1
Hypothetical protein; COG2041 Sulfite oxidase and related enzymes.
 
  
 0.921
AFK62138.1
Hypothetical protein.
 
   
 0.919
AFK61022.1
COG2897 Rhodanese-related sulfurtransferase.
    
 0.910
AFK62135.1
COG3258 Cytochrome c.
 
     0.896
AFK62134.1
Sulfite-dehydrogenase; COG2041 Sulfite oxidase and related enzymes.
 
   
 0.889
AFK62139.1
Sulfur oxidation protein 1.
 
   
 0.884
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.