STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62214.1COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains. (628 aa)    
Predicted Functional Partners:
AFK62213.1
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
 
    0.964
actP
Acetate permease; COG4147 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.754
AFK63162.1
SSS family solute/sodium (Na+) symporter; COG4147 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.675
AFK63164.1
COG3162 Predicted membrane protein.
 
  
 0.675
AFK62536.1
PEP synthetase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.
  
  
 0.603
actP-2
Acetate permease; COG4147 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.577
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.553
AFK62215.1
COG0346 Lactoylglutathione lyase and related lyases.
       0.531
AFK62216.1
Hypothetical protein.
       0.467
AFK61303.1
Hydrolase; COG1778 Low specificity phosphatase (HAD superfamily).
  
  
 0.425
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.