STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62215.1COG0346 Lactoylglutathione lyase and related lyases. (116 aa)    
Predicted Functional Partners:
AFK62216.1
Hypothetical protein.
       0.671
AFK62214.1
COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains.
       0.531
AFK62217.1
COG0625 Glutathione S-transferase; Belongs to the GST superfamily.
 
    0.504
AFK62157.1
COG0640 Predicted transcriptional regulators.
 
    0.490
AFK64200.1
COG0846 NAD-dependent protein deacetylases, SIR2 family.
 
    0.452
AFK62213.1
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
       0.428
AFK64225.1
Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
  
     0.412
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.