STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62247.1Hypothetical protein; COG0655 Multimeric flavodoxin WrbA. (169 aa)    
Predicted Functional Partners:
AFK64135.1
COG3126 Uncharacterized protein conserved in bacteria.
   
  
 0.647
AFK63875.1
COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.488
AFK62248.1
GTP pyrophosphokinase; COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases.
       0.476
AFK61178.1
Hypothetical protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
  
 0.456
AFK61730.1
COG1881 Phospholipid-binding protein.
 
  
 0.455
AFK61039.1
Hypothetical protein.
  
    0.446
AFK63974.1
Hypothetical protein.
  
    0.437
AFK63561.1
Superoxide dismutase copper/zinc binding protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
  
 0.402
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.