STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62293.1acetate/CoA ligase; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases. (81 aa)    
Predicted Functional Partners:
AFK62085.1
Iron-sulfur protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
  
   
 0.606
AFK61158.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.601
AFK61064.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.590
AFK63129.1
Dioxygenase; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
  
   
 0.589
AFK63257.1
COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
 
    0.557
AFK63324.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.540
AFK63144.1
COG1714 Predicted membrane protein/domain.
 
     0.537
AFK62212.1
Hypothetical protein.
  
     0.532
AFK61160.1
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); COG1012 NAD-dependent aldehyde dehydrogenases.
 
 
 0.517
AFK63258.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
 
  
 0.493
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.