STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62389.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
AFK62388.1
COG3198 Uncharacterized protein conserved in bacteria.
  
  
 0.927
AFK62387.1
Cytochrome C oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
  
 0.691
AFK60984.1
ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component.
   
    0.447
AFK63615.1
MauN, ferredoxin-type protein essential for electron transfer; COG0348 Polyferredoxin.
  
  
 0.432
AFK62386.1
Hypothetical protein; COG4736 Cbb3-type cytochrome oxidase, subunit 3.
  
    0.427
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.