STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62483.1Iron binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component. (343 aa)    
Predicted Functional Partners:
AFK62482.1
Binding-protein-dependent transporter inner membrane component family protein 37; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.995
AFK61365.1
COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport.
   
  
 0.913
AFK61124.1
Ferric iron ABC transporter iron-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
     
 0.905
AFK61126.1
Maltose/maltodextrin transport ATP-binding protein MalK; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.844
AFK62715.1
COG0848 Biopolymer transport protein.
  
  
 0.705
AFK64184.1
Periplasmic binding family protein 1; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
  
 0.650
AFK64134.1
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; COG0748 Putative heme iron utilization protein.
   
    0.640
AFK62484.1
Hypothetical protein.
       0.572
AFK61599.1
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
  
 0.531
AFK61813.1
Membrane transport protein; COG0477 Permeases of the major facilitator superfamily.
 
  
 0.478
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.