STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62550.1Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity. (86 aa)    
Predicted Functional Partners:
AFK62551.1
COG0239 Integral membrane protein possibly involved in chromosome condensation.
       0.773
AFK61706.1
COG0557 Exoribonuclease R.
 
     0.567
AFK64174.1
acyl-CoA dehydrogenase (flavoprotein) aidB protein; COG1960 Acyl-CoA dehydrogenases.
   
    0.478
AFK64175.1
COG1960 Acyl-CoA dehydrogenases.
   
    0.478
AFK63026.1
ATP-dependent Clp protease ATP-binding protein ClpA; COG0542 ATPases with chaperone activity, ATP-binding subunit.
 
  
 0.476
AFK62800.1
Transmembrane protein 1; COG2976 Uncharacterized protein conserved in bacteria.
  
     0.441
AFK62669.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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