STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62600.1Spermidine synthase-like protein; COG0421 Spermidine synthase. (245 aa)    
Predicted Functional Partners:
AFK62601.1
Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.749
priB
Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
 
    0.736
AFK61458.1
Hypothetical protein.
 
     0.662
AFK63519.1
Thioredoxin-like protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
   
 0.660
AFK63515.1
Phasin family domain-containing protein.
  
     0.657
AFK62958.1
Hypothetical protein.
  
   
 0.655
AFK63042.1
Hypothetical protein; COG0183 Acetyl-CoA acetyltransferase.
  
     0.641
AFK62228.1
Lysophospholipid transporter LplT; COG0477 Permeases of the major facilitator superfamily.
  
     0.630
AFK64530.1
COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
  
 0.628
AFK62230.1
Membrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.627
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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