STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62658.1COG0371 Glycerol dehydrogenase and related enzymes. (356 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.929
AFK62657.1
COG1802 Transcriptional regulators.
 
     0.797
AFK62656.1
COG3959 Transketolase, N-terminal subunit.
 
     0.654
AFK64204.1
2-keto-3-deoxygluconate permease.
  
     0.626
AFK64203.1
COG3395 Uncharacterized protein conserved in bacteria.
  
   
 0.599
AFK61160.1
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); COG1012 NAD-dependent aldehyde dehydrogenases.
  
  
 0.592
AFK63970.1
Class II aldolase/adducin domain protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
  
 0.436
AFK64040.1
COG1454 Alcohol dehydrogenase, class IV.
 
  
 0.422
AFK60754.1
NAD-dependent 4-hydroxybutyrate dehydrogenase; COG1454 Alcohol dehydrogenase, class IV.
 
  
 0.419
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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