STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62678.1COG2960 Uncharacterized protein conserved in bacteria. (94 aa)    
Predicted Functional Partners:
AFK63443.1
Hypothetical protein.
  
    0.650
AFK61320.1
COG3165 Uncharacterized protein conserved in bacteria.
  
   
 0.635
AFK61458.1
Hypothetical protein.
  
     0.588
ftsB
Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.572
AFK63622.1
COG3027 Uncharacterized protein conserved in bacteria.
  
  
 0.560
AFK63359.1
Lipoprotein; COG3317 Uncharacterized lipoprotein.
  
     0.541
AFK61199.1
Hypothetical protein.
  
     0.540
AFK63523.1
COG4391 Uncharacterized protein conserved in bacteria.
  
     0.526
AFK64388.1
COG4232 Thiol:disulfide interchange protein.
 
     0.502
AFK61859.1
ElaB-like protein.
 
     0.491
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.