STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62693.1COG3258 Cytochrome c. (336 aa)    
Predicted Functional Partners:
AFK62694.1
COG2863 Cytochrome c553.
 
  
 0.958
AFK62840.1
Putative cytochrome c4; COG2863 Cytochrome c553.
  
 0.957
AFK60894.1
Gluconate 2-dehydrogenase; COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.950
AFK62695.1
COG2863 Cytochrome c553.
 
  
 0.946
AFK61621.1
COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.942
AFK63751.1
COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.898
AFK62100.1
Beta-lactamase-like protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
    
 0.672
AFK63609.1
COG1858 Cytochrome c peroxidase.
  
 0.570
AFK64374.1
COG2863 Cytochrome c553.
 
  
 0.520
AFK61620.1
COG2863 Cytochrome c553.
 
  
 0.518
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.