STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62705.1HupE/UreJ protein; COG2370 Hydrogenase/urease accessory protein. (205 aa)    
Predicted Functional Partners:
ureB
Urease subunit beta; COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family.
  
  
 0.843
ureC-2
Urease subunit alpha; COG0804 Urea amidohydrolase (urease) alpha subunit.
  
  
 0.832
ureD-2
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.767
ureC-3
Urease subunit alpha; COG0804 Urea amidohydrolase (urease) alpha subunit; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
  
  
 0.632
ureF-2
Urease accessory protein UreF; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
   
 0.628
ureA
Urease subunit gamma; COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family.
       0.604
ureG-2
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
  
 0.597
AFK62145.1
Anti-sigma k factor rska.
 
     0.522
AFK62702.1
Urea ABC transporter ATP-binding protein UrtE; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
     
 0.479
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
  
 0.468
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.