STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62826.1Putative enoyl-CoA hydratase/isomerase; COG1024 Enoyl-CoA hydratase/carnithine racemase. (243 aa)    
Predicted Functional Partners:
AFK63403.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
   0.832
AFK64251.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
   0.824
AFK62848.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
   0.822
AFK63777.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   0.811
AFK64089.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
   0.809
AFK62827.1
Carbon monoxide dehydrogenase subunit G.
       0.773
AFK62543.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
   0.758
AFK62159.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
     0.724
AFK61031.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
     0.709
AFK62825.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
   
   0.690
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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