STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62839.1Metal transporter ATPase; COG2217 Cation transport ATPase. (751 aa)    
Predicted Functional Partners:
AFK62079.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
 
 
0.694
AFK60998.1
Copper-transporting ATPase 1; COG2608 Copper chaperone.
  
 
 0.568
AFK64240.1
Heavy metal transport/detoxification protein; COG2608 Copper chaperone.
  
 
 0.568
AFK62837.1
Hypothetical protein; COG2391 Predicted transporter component.
       0.535
AFK62838.1
Hypothetical protein; COG2391 Predicted transporter component.
       0.535
AFK61454.1
Cation diffusion facilitator family transporter; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.449
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.