STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62841.1COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit. (218 aa)    
Predicted Functional Partners:
AFK62387.1
Cytochrome C oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.999
AFK62842.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1.
 0.999
AFK62383.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1.
 
 0.995
AFK62386.1
Hypothetical protein; COG4736 Cbb3-type cytochrome oxidase, subunit 3.
  
 
 0.976
AFK62384.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1.
 
 
 0.955
AFK62385.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
  
 
0.924
AFK61201.1
Putative bifunctional protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.915
AFK61202.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
    
 0.908
AFK61204.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
    
 0.908
AFK62840.1
Putative cytochrome c4; COG2863 Cytochrome c553.
 
 
 0.875
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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