STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62882.1Oxidoreductase zinc-binding protein; COG2130 Putative NADP-dependent oxidoreductases. (330 aa)    
Predicted Functional Partners:
AFK64033.1
Alcohol dehydrogenase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  
 0.615
AFK62808.1
Oxidoreductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
 
 0.597
AFK62629.1
Alcohol dehydrogenase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  
 0.580
AFK62196.1
COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  
 0.561
AFK64121.1
DJ-1/PfpI family protein 1; COG0693 Putative intracellular protease/amidase.
 
    0.549
AFK60973.1
COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
  
0.438
AFK60772.1
Hypothetical protein; COG2030 Acyl dehydratase.
 
    0.430
AFK61178.1
Hypothetical protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
  
 0.424
AFK63396.1
COG1960 Acyl-CoA dehydrogenases.
  
    0.406
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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