STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62943.1COG3308 Predicted membrane protein. (163 aa)    
Predicted Functional Partners:
selO
Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
  
    0.851
AFK63515.1
Phasin family domain-containing protein.
  
     0.769
AFK61199.1
Hypothetical protein.
  
     0.766
AFK63042.1
Hypothetical protein; COG0183 Acetyl-CoA acetyltransferase.
  
     0.742
AFK62212.1
Hypothetical protein.
  
     0.738
AFK63129.1
Dioxygenase; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
  
     0.716
AFK63443.1
Hypothetical protein.
  
     0.715
AFK62500.1
Two-component sensor kinase; COG2202 FOG: PAS/PAC domain.
  
     0.699
AFK61497.1
Hypothetical protein; COG3245 Cytochrome c5.
  
     0.692
AFK61706.1
COG0557 Exoribonuclease R.
  
     0.685
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.