STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62985.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
AFK61191.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.774
AFK62164.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.774
AFK60775.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.773
AFK62874.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.773
AFK62853.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.771
AFK63414.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.770
AFK62305.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.757
AFK61314.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.726
AFK63314.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.714
AFK64213.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.709
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.