STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62986.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
AFK62987.1
COG2064 Flp pilus assembly protein TadC.
 
     0.949
AFK62989.1
General secretion pathway ATPase; COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
     0.949
AFK62988.1
Type II secretion system protein; COG4965 Flp pilus assembly protein TadB.
 
     0.946
AFK62990.1
SAF domain protein; COG3745 Flp pilus assembly protein CpaB.
 
     0.937
AFK62991.1
Hypothetical protein.
       0.720
AFK62993.1
Hypothetical protein.
       0.647
AFK62994.1
Integral membrane protein.
       0.635
AFK62992.1
Hypothetical protein.
       0.624
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.