STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63024.1COG2995 Uncharacterized paraquat-inducible protein A. (328 aa)    
Predicted Functional Partners:
AFK63025.1
COG2995 Uncharacterized paraquat-inducible protein A.
     0.990
AFK63026.1
ATP-dependent Clp protease ATP-binding protein ClpA; COG0542 ATPases with chaperone activity, ATP-binding subunit.
       0.781
AFK63027.1
ATP-dependent Clp protease ATP-binding protein ClpA; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
       0.781
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
       0.647
AFK62105.1
Hypothetical protein.
  
     0.541
AFK64262.1
Hypothetical protein.
  
     0.540
AFK62921.1
Hypothetical protein; COG1217 Predicted membrane GTPase involved in stress response.
  
     0.525
AFK62922.1
Hypothetical protein.
  
     0.521
AFK63209.1
Hypothetical protein.
  
     0.518
AFK62923.1
Hypothetical protein.
  
     0.490
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.