STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63072.1Dehydrogenase; COG2303 Choline dehydrogenase and related flavoproteins. (259 aa)    
Predicted Functional Partners:
AFK63073.1
Glucose-methanol-choline oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins.
     0.989
AFK63074.1
Dehydrogenase; COG2303 Choline dehydrogenase and related flavoproteins.
     0.989
AFK60911.1
GMC oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins.
  
  
 
0.909
AFK62085.1
Iron-sulfur protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
    
 0.907
AFK63129.1
Dioxygenase; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
    
 0.907
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
 0.804
AFK63872.1
Methyltransferase type 12; COG3963 Phospholipid N-methyltransferase.
     
  0.800
AFK64211.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
    
 0.513
AFK63071.1
Hypothetical protein.
       0.508
AFK60825.1
Ankyrin repeat-containing protein; COG0666 FOG: Ankyrin repeat.
    
 0.439
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.