STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63077.1D-amino acid dehydrogenase 2 small subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). (236 aa)    
Predicted Functional Partners:
AFK63076.1
D-amino acid dehydrogenase small subunit; COG0665 Glycine/D-amino acid oxidases (deaminating).
     0.994
AFK63407.1
D-amino acid dehydrogenase small subunit; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
  
 
0.921
AFK63687.1
D-amino-acid dehydrogenase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
  
 
0.910
AFK61416.1
COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
     
 0.904
hisC
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.903
hisC-2
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.903
AFK61574.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
    
 0.902
AFK63688.1
D-amino-acid dehydrogenase; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
     0.826
AFK61347.1
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
     0.774
AFK63078.1
Hypothetical protein.
       0.655
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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