STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63146.1Transferase hexapeptide family protein 2; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. (173 aa)    
Predicted Functional Partners:
AFK63145.1
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
  
  
 0.833
AFK63147.1
Chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.
       0.771
AFK63729.1
COG0288 Carbonic anhydrase.
    
 
 0.759
AFK63175.1
COG4451 Ribulose bisphosphate carboxylase small subunit.
   
 
 0.713
AFK61550.1
RuBisCO-like protein; COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family.
    
 
 0.676
rbcL
COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family.
    
 
 0.676
AFK63144.1
COG1714 Predicted membrane protein/domain.
     
 0.585
AFK64078.1
Phenylhydantoinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
  
 0.442
AFK61700.1
COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
  
 0.438
AFK64545.1
AMP-binding protein; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
  
  
 0.424
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.