STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfaGlutathione-dependent formaldehyde-activating enzyme; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family. (189 aa)    
Predicted Functional Partners:
AFK63182.1
COG1062 Zn-dependent alcohol dehydrogenases, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 0.991
AFK63168.1
Pyrrolo-quinoline quinone; COG4993 Glucose dehydrogenase.
 
  
 0.947
AFK61211.1
Esterase; Serine hydrolase involved in the detoxification of formaldehyde.
 
  
 0.926
AFK63610.1
Amine dehydrogenase; Belongs to the aromatic amine dehydrogenase light chain family.
     
  0.900
AFK63612.1
Amine dehydrogenase.
     
 0.900
AFK63170.1
Family 3 extracellular solute-binding protein.
 
   
 0.577
AFK63165.1
Hypothetical protein.
 
     0.475
AFK64275.1
Hypothetical protein.
  
     0.460
AFK61782.1
Hypothetical protein.
 
    0.404
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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