STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63195.1Binding-protein-dependent transport system inner membrane protein; COG0395 ABC-type sugar transport system, permease component. (304 aa)    
Predicted Functional Partners:
AFK63194.1
Binding-protein-dependent transport system inner membrane protein; COG1175 ABC-type sugar transport systems, permease components.
 
 0.978
AFK63193.1
Family 1 extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
 
 0.970
AFK63482.1
COG1175 ABC-type sugar transport systems, permease components.
 
 0.912
AFK62490.1
COG1175 ABC-type sugar transport systems, permease components.
 
 0.906
ugpC
Glycerol-3-phosphate transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.901
AFK63847.1
Sugar ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.900
AFK63481.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.898
AFK61126.1
Maltose/maltodextrin transport ATP-binding protein MalK; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.834
AFK63484.1
Extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
 
 0.804
AFK63848.1
Binding-protein-dependent transport system inner membrane protein; COG1175 ABC-type sugar transport systems, permease components.
 
0.717
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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