STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63222.1COG0477 Permeases of the major facilitator superfamily. (126 aa)    
Predicted Functional Partners:
AFK63223.1
COG1309 Transcriptional regulator.
 
  
 0.805
AFK63152.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.733
AFK63153.1
EmrB/QacA subfamily drug resistance transporter; COG0477 Permeases of the major facilitator superfamily.
  
     0.731
AFK64299.1
Drug efflux transporter; COG0477 Permeases of the major facilitator superfamily.
  
     0.600
AFK61105.1
Transport transmembrane protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.554
AFK62308.1
Drug resistance transporter Bcr/CflA subfamily protein 3; COG0477 Permeases of the major facilitator superfamily.
  
   
 0.511
AFK62512.1
Bcr/CflA subfamily drug resistance transporter; COG0477 Permeases of the major facilitator superfamily.
  
   
 0.506
AFK64298.1
COG1566 Multidrug resistance efflux pump.
  
 
 0.494
AFK62048.1
Hypothetical protein; COG0730 Predicted permeases.
  
   
 0.408
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.