STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63226.1COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family. (69 aa)    
Predicted Functional Partners:
AFK61756.1
Hypothetical protein.
 
  
 0.803
AFK60855.1
Hypothetical protein.
   
    0.555
AFK61612.1
Hypothetical protein.
   
    0.555
AFK63286.1
Ferritin Dps family protein; COG2193 Bacterioferritin (cytochrome b1).
  
    0.487
AFK64280.1
COG1596 Periplasmic protein involved in polysaccharide export.
   
    0.479
AFK62455.1
Hypothetical protein.
   
    0.445
AFK61291.1
Hypothetical protein; COG2823 Predicted periplasmic or secreted lipoprotein.
  
  
 0.426
AFK62679.1
Putative cytochrome c5.
  
  
 0.425
AFK61859.1
ElaB-like protein.
  
  
 0.424
AFK61121.1
Transglycosylase associated family protein; COG2261 Predicted membrane protein.
  
  
 0.406
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.