STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63269.1Putative Glyoxalase/bleomycin resistance protein/dioxygenase. (123 aa)    
Predicted Functional Partners:
AFK63192.1
Spermidine N1-acetyltransferase; COG0456 Acetyltransferases.
      0.657
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.445
AFK63819.1
COG1145 Ferredoxin.
  
  
 0.445
nuoD
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
  
 0.432
AFK63266.1
Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; COG1049 Aconitase B.
  
    0.431
AFK63267.1
Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; COG1049 Aconitase B.
  
    0.431
AFK63268.1
Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; COG1049 Aconitase B.
  
    0.431
AFK63005.1
Hypothetical protein; COG0730 Predicted permeases.
  
     0.420
AFK60876.1
Hypothetical protein.
 
     0.413
AFK62810.1
COG2124 Cytochrome P450.
 
 
 
 0.403
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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