STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63294.1Hypothetical protein; COG2030 Acyl dehydratase. (154 aa)    
Predicted Functional Partners:
AFK63295.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.910
AFK63293.1
COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
 
 0.846
AFK63328.1
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
   0.821
AFK63296.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.818
AFK63330.1
Thiolase; COG0183 Acetyl-CoA acetyltransferase.
 
 
 0.779
AFK61166.1
Dehydratase; COG2030 Acyl dehydratase.
  
     0.760
AFK61055.1
COG0372 Citrate synthase.
 
 
 0.621
AFK62119.1
COG0372 Citrate synthase.
 
 
 0.619
AFK64099.1
Dehydratase; COG2030 Acyl dehydratase.
  
     0.610
AFK63338.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.599
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.