STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63305.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
AFK60876.1
Hypothetical protein.
     0.977
AFK63304.1
N-acetyltransferase YnaD; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.752
AFK64029.1
Hypothetical protein.
 
     0.728
AFK62217.1
COG0625 Glutathione S-transferase; Belongs to the GST superfamily.
  
     0.547
AFK60887.1
COG4312 Uncharacterized protein conserved in bacteria.
  
     0.461
AFK60889.1
Hypothetical protein.
  
     0.441
AFK63737.1
COG0625 Glutathione S-transferase.
  
     0.437
AFK60888.1
Hypothetical protein; COG3823 Glutamine cyclotransferase.
  
     0.427
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.