STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63309.1CoA-binding protein; COG1042 Acyl-CoA synthetase (NDP forming). (662 aa)    
Predicted Functional Partners:
AFK62162.1
CoA-binding domain-containing protein; COG1042 Acyl-CoA synthetase (NDP forming).
  
  
 
0.927
AFK61032.1
COG1042 Acyl-CoA synthetase (NDP forming).
  
  
 
0.924
AFK62118.1
ATP-grasp domain-containing protein 3; COG1042 Acyl-CoA synthetase (NDP forming).
  
  
 
0.921
AFK64339.1
CoA-binding domain protein; COG1042 Acyl-CoA synthetase (NDP forming).
  
  
 
0.919
AFK64604.1
CoA-binding protein; COG1042 Acyl-CoA synthetase (NDP forming).
  
  
 
0.914
AFK62179.1
AMP-dependent synthetase/ligase; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
    
 0.906
AFK62294.1
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
    
 0.906
AFK63145.1
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
    
 0.906
AFK64145.1
Phosphate acetyltransferase; COG0280 Phosphotransacetylase.
     
 0.906
AFK63261.1
COG0372 Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.904
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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