STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63331.1COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (232 aa)    
Predicted Functional Partners:
AFK63390.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 0.999
AFK62297.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 
 0.994
AFK63388.1
Beta-ketoadipyl CoA thiolase; COG0183 Acetyl-CoA acetyltransferase.
  
 
 0.921
AFK63993.1
COG1454 Alcohol dehydrogenase, class IV.
  
 
 0.912
AFK64040.1
COG1454 Alcohol dehydrogenase, class IV.
  
 
 0.912
AFK61752.1
Beta-ketoadipate enol-lactone hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
 0.905
AFK62825.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
 0.905
AFK63389.1
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
  
  
 
0.904
AFK64252.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
  
 
 0.769
AFK63332.1
COG3181 Uncharacterized protein conserved in bacteria.
  
    0.495
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.