STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63335.1Tat pathway signal sequence domain-containing protein 5; COG3181 Uncharacterized protein conserved in bacteria. (332 aa)    
Predicted Functional Partners:
AFK64142.1
Extra-cytoplasmic solute receptor; COG3181 Uncharacterized protein conserved in bacteria.
  
     0.658
AFK62353.1
Hypothetical protein.
 
    0.634
AFK64430.1
Hypothetical protein.
 
    0.629
AFK60870.1
COG3333 Uncharacterized protein conserved in bacteria.
 
  
 0.609
AFK63336.1
COG0861 Membrane protein TerC, possibly involved in tellurium resistance.
       0.482
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.