STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63374.1GlcG protein; COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol. (135 aa)    
Predicted Functional Partners:
glcF
Glycolate oxidase iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
 
  
 0.837
glcE
Glycolate oxidase FAD binding subunit; COG0277 FAD/FMN-containing dehydrogenases.
 
  
 0.621
AFK63373.1
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
       0.446
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
  
 0.443
AFK61012.1
COG2225 Malate synthase.
  
  
 0.443
AFK62800.1
Transmembrane protein 1; COG2976 Uncharacterized protein conserved in bacteria.
  
     0.420
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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