STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63383.1COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (296 aa)    
Predicted Functional Partners:
AFK63384.1
COG0765 ABC-type amino acid transport system, permease component.
 0.992
AFK63386.1
Glutamate and aspartate ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.988
AFK63385.1
Polar amino acid ABC transporter, inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
 0.978
AFK63410.1
Polar amino acid ABC transporter inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
 0.969
AFK63409.1
COG0765 ABC-type amino acid transport system, permease component.
 
 0.960
AFK63408.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.932
AFK63412.1
Family 3 extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
  
 
0.911
AFK61938.1
ABC transporter permease; COG0765 ABC-type amino acid transport system, permease component.
 
 0.657
AFK63382.1
Hypothetical protein.
       0.533
AFK61576.1
COG0765 ABC-type amino acid transport system, permease component.
 
 0.508
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.