STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63392.1COG0183 Acetyl-CoA acetyltransferase. (153 aa)    
Predicted Functional Partners:
AFK63393.1
COG0183 Acetyl-CoA acetyltransferase.
     0.994
AFK63388.1
Beta-ketoadipyl CoA thiolase; COG0183 Acetyl-CoA acetyltransferase.
     0.983
AFK63395.1
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.916
AFK63394.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.892
AFK60804.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.840
AFK63391.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.830
AFK61565.1
COG1257 Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
 
  
 0.796
AFK63328.1
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
  
 
 0.733
AFK62286.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.682
AFK63396.1
COG1960 Acyl-CoA dehydrogenases.
 
 
 0.678
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.