STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63405.1COG1960 Acyl-CoA dehydrogenases. (127 aa)    
Predicted Functional Partners:
AFK63404.1
COG1960 Acyl-CoA dehydrogenases.
     0.994
AFK63295.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.963
AFK61034.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.882
AFK64338.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.847
AFK62965.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 0.843
AFK63398.1
COG1960 Acyl-CoA dehydrogenases.
  
     0.773
AFK61035.1
Hypothetical protein; COG1960 Acyl-CoA dehydrogenases.
  
     0.771
AFK63403.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.737
AFK62966.1
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.728
AFK61082.1
COG1960 Acyl-CoA dehydrogenases.
  
     0.718
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.