STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63443.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
AFK63523.1
COG4391 Uncharacterized protein conserved in bacteria.
  
     0.772
AFK63042.1
Hypothetical protein; COG0183 Acetyl-CoA acetyltransferase.
  
     0.750
AFK63359.1
Lipoprotein; COG3317 Uncharacterized lipoprotein.
 
     0.732
AFK62943.1
COG3308 Predicted membrane protein.
  
     0.715
AFK61276.1
Hypothetical protein.
  
     0.705
AFK62424.1
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
     0.680
AFK63117.1
Hypothetical protein.
  
     0.663
AFK62678.1
COG2960 Uncharacterized protein conserved in bacteria.
  
    0.650
AFK61787.1
Methyltransferase; COG0500 SAM-dependent methyltransferases.
 
     0.647
AFK63014.1
COG1398 Fatty-acid desaturase.
  
     0.640
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.