STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63475.1Two component Fis family transcriptional regulator; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. (181 aa)    
Predicted Functional Partners:
AFK63474.1
COG0642 Signal transduction histidine kinase.
 
  
 0.996
AFK63473.1
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion.
 
     0.872
AFK63472.1
COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4.
 
     0.663
AFK63471.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
     0.553
AFK62500.1
Two-component sensor kinase; COG2202 FOG: PAS/PAC domain.
  
  
 0.517
AFK63470.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1.
 
   
 0.506
AFK63468.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1.
 
   
 0.499
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.