STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63481.1Sn-glycerol-3-phosphate import ATP-binding protein UgpC; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (399 aa)    
Predicted Functional Partners:
AFK63482.1
COG1175 ABC-type sugar transport systems, permease components.
 
 0.974
AFK63483.1
Binding-protein dependent transport system inner membrane protein; COG0395 ABC-type sugar transport system, permease component.
 
 0.974
AFK63484.1
Extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.919
AFK63847.1
Sugar ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
  
 
0.912
ugpE
Sn-glycerol-3-phosphate transport system permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.908
AFK63195.1
Binding-protein-dependent transport system inner membrane protein; COG0395 ABC-type sugar transport system, permease component.
 
 0.898
AFK63848.1
Binding-protein-dependent transport system inner membrane protein; COG1175 ABC-type sugar transport systems, permease components.
 
 
 0.891
AFK63849.1
Binding-protein-dependent transport system inner membrane protein; COG0395 ABC-type sugar transport system, permease component.
 
 0.891
AFK63194.1
Binding-protein-dependent transport system inner membrane protein; COG1175 ABC-type sugar transport systems, permease components.
 
 
 0.889
AFK62490.1
COG1175 ABC-type sugar transport systems, permease components.
 
 
 0.862
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.