STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63539.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (676 aa)    
Predicted Functional Partners:
AFK63540.1
Hypothetical protein.
       0.781
AFK60878.1
TonB-dependent receptor, plug; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.723
AFK63538.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
   
 0.674
AFK62626.1
FecR; COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.670
AFK63644.1
Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
   
 0.649
AFK62625.1
COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.566
AFK62084.1
IucA/IucC protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
 
  
 0.564
AFK63642.1
Ferrichrome transport ATP-binding protein fhuC; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
  
 0.561
AFK64060.1
Enterobactin receptor protein; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
  
0.528
AFK62624.1
TonB-dependent siderophore receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.510
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.