STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63554.1Hemin transport protein; COG3720 Putative heme degradation protein. (345 aa)    
Predicted Functional Partners:
AFK63553.1
Hemin ABC transporter substrate-binding protein; COG4558 ABC-type hemin transport system, periplasmic component.
  
 0.997
hmuV
Hemin importer ATP-binding subunit; COG4559 ABC-type hemin transport system, ATPase component.
  
 0.991
AFK63552.1
COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.967
AFK63555.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.835
AFK63642.1
Ferrichrome transport ATP-binding protein fhuC; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
   
 0.781
AFK60931.1
iron(III) dicitrate transport ATP-binding protein FecE 1; COG4604 ABC-type enterochelin transport system, ATPase component.
 
    
 0.691
AFK64322.1
COG2375 Siderophore-interacting protein.
 
  
 0.631
AFK60881.1
COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.570
AFK63708.1
COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
    
 0.563
AFK63706.1
Ferric achromobactin inner membrane permease; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.502
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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