STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK63607.1Methylamine utilization protein mauL. (60 aa)    
Predicted Functional Partners:
AFK63610.1
Amine dehydrogenase; Belongs to the aromatic amine dehydrogenase light chain family.
   
   0.874
AFK63609.1
COG1858 Cytochrome c peroxidase.
  
    0.793
AFK63608.1
Hypothetical protein.
       0.773
AFK63612.1
Amine dehydrogenase.
   
   0.595
AFK61761.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
   
   0.451
AFK62810.1
COG2124 Cytochrome P450.
  
 
 0.412
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.